PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019167634.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 734aa MW: 83560.8 Da PI: 6.8881 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.6 | 1.2e-19 | 71 | 157 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA++vGFsvrk +++ + ++++ ++ f+Csk g++ + + + ++ tr gC a+++ +dg w vtk ++ HnHel+ XP_019167634.1 71 LYNNYAYRVGFSVRKGNQRCKVYSKTVQMKMFMCSKAGFKVKANAG--VRAYSKIDTRSGCGACVQFDVGEDGLWTVTKHVEVHNHELC 157 7***************************************998877..888899**********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 734 aa Download sequence |
MDDAVDQRDE ALDQRDEAGD ELHTVPVSED VVVDSPSSDP IELDIDGSSS NPVDEDLVGV 60 VVSNGVEAYE LYNNYAYRVG FSVRKGNQRC KVYSKTVQMK MFMCSKAGFK VKANAGVRAY 120 SKIDTRSGCG ACVQFDVGED GLWTVTKHVE VHNHELCAVD KSHLLRSHRN VGDNQLLYLK 180 DLKKSGVAMA DGIRFLKHQA GGSPLVGFTN RDAYNSIASD TSKRLDGTDS NSLIEIFRKR 240 QSTESDFFFD FEVDCDSRLC SFFWRDGRMR QDYELFGDLL VHDTTYRTNK YDMICGPFVG 300 MNHHCMNVMF GCGFLMNERI ESFVWLFRAF LRSMNGKCPQ TIMTDQCASM AAAICQVFPT 360 SRHRLCIWHI GENSKKHIKA LRNNKDFLDM FNCVLKYTET EAEFEFYWTR LVTDYKCNKN 420 SWIQKLYDCR EKWCPAFNKD YFSGGILSSQ RSETTNHSIS RRLSKTAGLC DFYSSFVSVT 480 SEWRSKENGE DFRCTQGVPN MMMEHVKLLL HAREVYTIEI YFLFEEQFMK GNACHQEMVL 540 NEGCQFKYHV WRPDIDIIRH EVSFKLSTLD ISCSCKLISE LGILCCHCLR ILHIHCVSSI 600 PNKYIMKRWT KKVADGRDVN TGSMFCRAGV PPSIWVVEIC RKFQRLISSS QDNSVTRQFC 660 DEAVEEAKKK KYSAARGRRS AANKVASSTK GAVQSLVLES LSEIAGDGYL VHPSSGSSEF 720 CQYSNDVDDN AVVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-80 | FAR1 family protein |