PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019167630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 162aa MW: 18409.2 Da PI: 7.7102 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 27 | 5.8e-09 | 4 | 40 | 13 | 49 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyey 49 f k +n i K A+ +++LC+a+v i fs g++y + XP_019167630.1 4 FYKGKNSIVKRANQICTLCAANVVTICFSICGQMYVF 40 8899******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MANFYKGKNS IVKRANQICT LCAANVVTIC FSICGQMYVF GDETIINAFE EETTIAPQCT 60 LKCTAHKPPR YFKLQNWTNK NNISASSSSA SSFHMEKGQK KCVKSPINPP TNMDEFSDKL 120 IVPQIEQLEE KMEEFKEIMA QQYLFLRTQL NVTESSAMQK ID |