PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167337.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 240aa    MW: 26006 Da    PI: 9.3342
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000256688123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  XP_019167337.1 66 FSCNYCRRKFYSSQALGGHQNAH 88
                    89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEIRQEEREQ DQEAAGEERR GGVLLDLSLS RREGSDKTPP PPAAAAAEEE FRGPKGSSET  60
TEPRVFSCNY CRRKFYSSQA LGGHQNAHKR ERTMAKRGQK MLAAAAAFGY DAPMHRYPSM  120
ASLPLHGSYN RSLGIQAHSM IHKPGGGYFG APATGAGPYG YSGWPRRPLD QQPAVGRLPP  180
TECLGSSSNS GAARFDSEPK FPPLVDGGIR WDSVGRGGGA SHIKINNQDE LNKLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.11e-40C2H2 family protein