PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019167275.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 245aa MW: 28497.7 Da PI: 4.593

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019167275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.3	1.7e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+k++g ++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v XP_019167275.1 6 LPPGFRFHPTDEELVNYYLKRKIHGLEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVN 99 79**************************.99**********84335556888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+kktLv+y+grap+g +tdWvmheyrl XP_019167275.1 100 S-QNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 .8999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LEIELDIIPE VDLYKCEPWE LAEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVNS QNRAIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDRECED TSAGIQVDSY ALCRVFKKNG ICSEIEEQAQ PSNIQILDYS 180 SAQTVANDQY ETPSPEVPFT SSSCVEEEEK EDKDDSWMQF ITEDAWCSFT SPYGTEELSQ 240 TTFTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-121	NAC family protein