PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167027.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 378aa    MW: 42744.5 Da    PI: 4.3855
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.92.3e-08122170247
                      SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+el+ ++v    + lG++ W+  a +++ +Rt+ +++s+++++
   XP_019167027.1 122 QKWTEEEQELFHEVVssspASLGKNFWHHLAVEFP-HRTRREIVSYYFNV 170
                      79*************3333357777**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MHQAEIPECG GCGNKEKANS SKDACKTIDH SYESLESNCG GQFDYENRLA GTCIVPNSKS  60
ESAAYSSEAV ASGRSDCCCE DTGSVRCIQQ HIIEAREKLK TLLGEETFVK LGFYDMGEVV  120
AQKWTEEEQE LFHEVVSSSP ASLGKNFWHH LAVEFPHRTR REIVSYYFNV FMLRIRAEQN  180
RLDPLNIDSD NDEWQEEAYD SAGEEEAKMT DEDEDSVVES PVHHDDPGHI LIYDDYKHPY  240
YEDAGLAIWR DYKHLGHDTN KVVTTVPEEC GDKLFEKHSS ELTVQHPDRS EPNEANHAEL  300
DGPSTRADNK HWTSDYVGTG NSNGHEFVLE PRFGREWDVG YSSCTKNDVD FLPTCSMIEE  360
VFGNEACYDK SRDGYGSS