PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166497.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 324aa    MW: 37036.7 Da    PI: 8.1818
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.11.3e-47131382128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     ppG+rFhP+d+el+v+yL +kv++++l++  +i++v+ y+++PwdLpk +  +e+ew+fFs+rd+ky++g r+nr+t+sgyWkatg+d+++ls +
  XP_019166497.1  13 PPGVRFHPSDQELIVYYLFNKVNSHPLPA-CIITDVEFYNYNPWDLPKLAIFGENEWFFFSPRDRKYPNGVRPNRTTASGYWKATGTDRPILSPD 106
                     9**************************99.78***************76666899**************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     g+++g+kk Lvfy g+ap+g ktdW + eyrl
  XP_019166497.1 107 GSQIGVKKALVFYIGKAPSGLKTDWNLMEYRL 138
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MASGPAISSF HFPPGVRFHP SDQELIVYYL FNKVNSHPLP ACIITDVEFY NYNPWDLPKL  60
AIFGENEWFF FSPRDRKYPN GVRPNRTTAS GYWKATGTDR PILSPDGSQI GVKKALVFYI  120
GKAPSGLKTD WNLMEYRLPD TSIKPSRPKG SSMRLDDWVL CRVRQKGNMS KNAWEAQPSP  180
QELLLSYLPN NEKPPSVNDD PLRDVHTHYL LTKENSLIYS MFMQGLIPLE NILRAASQFS  240
SDGKYYTGYE HESGKVNTQV TNSSLQSFFG SSKRKHDDLI KTISDGNKNE DFLLSNMLAT  300
NHRNFYNENQ PPVDTFSEIQ YQMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-69NAC family protein