PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166258.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 338aa    MW: 36486.4 Da    PI: 9.1429
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166258.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.14.4e-4258133176
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                     +CqvegC+adlse k y+++hkvC +hsk+p+v+vsgleqrfCqqCsrfh+lsefD+ krsCrrrLa+hnerrrk+
  XP_019166258.1  58 RCQVEGCKADLSEFKAYYSKHKVCGMHSKSPKVIVSGLEQRFCQQCSRFHQLSEFDQVKRSCRRRLAGHNERRRKP 133
                     6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MELGSSSSST STSADSSSDG LKFGKKVYFE DAGGGSGGSS LPAKRGRSAV AQGGQPPRCQ  60
VEGCKADLSE FKAYYSKHKV CGMHSKSPKV IVSGLEQRFC QQCSRFHQLS EFDQVKRSCR  120
RRLAGHNERR RKPPLGSILS THYGTLSSSM FGNNGHFVMD FASYPYPGGK GSWRPSTNGV  180
GNFLQQPWQR NSEDPPPKLL LLGSDAAARA TYPSPCGEYF NGVSDSTRAL SLLSNSNQPW  240
GSRNQQPSGL GVNSLLNTDG TLAVHPSGSH AAVINEFSSS PWGFKGNQAT TSSDKILPDS  300
HYSGELEMMA HQQTGRAYMG MEYSTGYDSS VQNVHWTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.15e-62SBP family protein