PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166257.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 340aa    MW: 36686.6 Da    PI: 9.1429
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.14.4e-4258133176
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                     +CqvegC+adlse k y+++hkvC +hsk+p+v+vsgleqrfCqqCsrfh+lsefD+ krsCrrrLa+hnerrrk+
  XP_019166257.1  58 RCQVEGCKADLSEFKAYYSKHKVCGMHSKSPKVIVSGLEQRFCQQCSRFHQLSEFDQVKRSCRRRLAGHNERRRKP 133
                     6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MELGSSSSST STSADSSSDG LKFGKKVYFE DAGGGSGGSS LPAKRGRSAV AQGGQPPRCQ  60
VEGCKADLSE FKAYYSKHKV CGMHSKSPKV IVSGLEQRFC QQCSRFHQLS EFDQVKRSCR  120
RRLAGHNERR RKPPLGSILS THYGTLSSSM FVTGNNGHFV MDFASYPYPG GKGSWRPSTN  180
GVGNFLQQPW QRNSEDPPPK LLLLGSDAAA RATYPSPCGE YFNGVSDSTR ALSLLSNSNQ  240
PWGSRNQQPS GLGVNSLLNT DGTLAVHPSG SHAAVINEFS SSPWGFKGNQ ATTSSDKILP  300
DSHYSGELEM MAHQQTGRAY MGMEYSTGYD SSVQNVHWTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.14e-60SBP family protein