PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166229.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 326aa    MW: 36858.2 Da    PI: 6.4421
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.82.2e-322074155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+WtpeLH+rF++av+qLGG+ekAtPk++++lm+++gLtl+h+kSHLQk+Rl
  XP_019166229.1 20 KPRLKWTPELHQRFIDAVAQLGGAEKATPKSLMRLMNIHGLTLYHLKSHLQKFRL 74
                    79****************************************************8 PP
2Myb_DNA-binding60.92.7e-192273148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+e++++++dav+qlGg    t+k+ +r m+  g+tl+++ks++qk++
   XP_019166229.1 22 RLKWTPELHQRFIDAVAQLGGAekaTPKSLMRLMNiHGLTLYHLKSHLQKFR 73
                     89******************99****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MALQDLQNKD TNLVLSSDPK PRLKWTPELH QRFIDAVAQL GGAEKATPKS LMRLMNIHGL  60
TLYHLKSHLQ KFRLAKSQEL QSYHDDNKDE DYKQSQSQES QIHSDGAQNQ MNESMQVAQA  120
LQMQMEVQRK LHEQIKVQRH LQLRIEAQGK YLQSVLKKAQ ETLGRYGPSA HAELAKAELS  180
QLVSMVDTGC PSSSLSVLTE IGGSISNCRE QLRTGIGCSL DSSLTSSESS GRKEDTQERH  240
ENKENDERKE NSVELSLMEM HPGQQNGSKD DPSGRKRSRS IISFDNCVEK PSDKRFQASI  300
NDEKLKKFGF LENIDLNSEC VDDFDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.13e-72G2-like family protein