PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019166138.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 218aa MW: 24773.7 Da PI: 9.1917 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.8 | 6.1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRr+g+lKKA+ELS+LCdaevavi+fs tg+lye++s XP_019166138.1 9 KKIENINSRQVTFSKRRAGLLKKAKELSILCDAEVAVIVFSGTGRLYEFAS 59 68***********************************************86 PP | |||||||
2 | K-box | 68.5 | 2.1e-23 | 95 | 179 | 16 | 100 |
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 lq e++ L++e+ n+ + + +++G+dLe L++keLq+Le+qL +++ +++++K+++l+eq+e+++ +e++++ en+ Lr+++ee XP_019166138.1 95 DLQPEVNALRAELANMHKLHCRMMGKDLEGLNFKELQHLEHQLTEGILTVKDTKEQVLFEQLEKSRLQEEKIKLENQVLREQIEE 179 6899******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MGRGKIEIKK IENINSRQVT FSKRRAGLLK KAKELSILCD AEVAVIVFSG TGRLYEFASS 60 SMERVLAKYN KVPTTAESPA KVEIIAAEPQ VLKHDLQPEV NALRAELANM HKLHCRMMGK 120 DLEGLNFKEL QHLEHQLTEG ILTVKDTKEQ VLFEQLEKSR LQEEKIKLEN QVLREQIEEL 180 RGSSRPYLPE KKNFLASLSA MCDCRSKREG NSDKSNVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 4e-50 | MIKC_MADS family protein |