PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019166127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 300aa MW: 33155.9 Da PI: 10.1097 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36 | 1.6e-11 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT eE+ l+ +v ++G+g W+tI + R+ ++k++w++ XP_019166127.1 5 KQKWTSEEEAALKAGVLKHGPGKWRTILKDPEysgvlYLRSNVDLKDKWRNM 56 79****************************99999**88***********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MGAPKQKWTS EEEAALKAGV LKHGPGKWRT ILKDPEYSGV LYLRSNVDLK DKWRNMTVMA 60 NGWGSREKSR LAVKRMHRTS KQDENSLALT NVVQSEEESS EGKRVETSSG SPQNGGSKRS 120 IIRLDNLVMD AINNLKEPGG SNKKTIAAYI EDQYWAPPNF KRLLSAKLKY LTATGKLMKM 180 SRKYRIVPSS LLSNNTRNPP IPILEGRERI LPKVDRYDID MLTKSQIDLE LAKMRSMTPQ 240 EAAATAAQAV AEAEAAIAEA EQAAREAEAA EADAEAALAF AEAAMKTVHG RSTPRMMIQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 1e-103 | MYB_related family protein |