PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165971.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family E2F/DP
Protein Properties Length: 337aa    MW: 36882.4 Da    PI: 6.6323
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.49.2e-2788169271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr+++ k   ++ek+e+ g++t+neva+eLv++               d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_019165971.1  88 SGRGLRQFSLK---VCEKVESkGRTTYNEVADELVADfadpnntlaspdqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 169
                     689********...*****999******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MVNNQEPSKI GVGGAPRPCG TTISGQSVST SSSVGSPSSR SEAAVVTPAS ETTFAQLNNL  60
DIHGDDARPQ EAAGKKKRGQ RASGGDKSGR GLRQFSLKVC EKVESKGRTT YNEVADELVA  120
DFADPNNTLA SPDQQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL PQTSINDIEE  180
LKSECLRLRN RIERKATYLE ELEEQYVGLQ NIIKRNEQLY GSGNSPSGGV AFPFILVQTR  240
PHATVEVEIS EDMQLVHFDF NSTPFELHDD CYVLKAMKLC ERPKRGDGGE SSSTPIVLQP  300
QTPHPPVPSV SGMPSVSPPL PGILKARIKH EHPSSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-139E2F/DP family protein