PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165668.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 296aa    MW: 32464.2 Da    PI: 8.255
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer110.49.7e-3546101458
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                     v+YkeClkNhAas+Ggha+DGCgEfmp+++++ +++++lkCaACgCHRnFHRre+ 
  XP_019165668.1  46 VVYKECLKNHAASMGGHALDGCGEFMPAPDATpADPTSLKCAACGCHRNFHRREPP 101
                     79******************************9********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDLTTSPTTK TPDSENDTPP QPRLKPLSFV NGAAAAHRKL APPPPVVYKE CLKNHAASMG  60
GHALDGCGEF MPAPDATPAD PTSLKCAACG CHRNFHRREP PDDYSISSPH FIDFRHPFRR  120
RSSPSPSPPP PPPPQHMLLA LTTPPEDSFH HNHHLTPVTP TAVKTENTAG RKRFRTKFTQ  180
EQKEKMHNFS EKLGWKLQKS DEVSVERFCN EIGVSRGVLK VWMHNNKNTL GKKDNVSNGG  240
FNVINGGGTI KNDGVDNNNN SNSSNDHNAS SSHCRDDDQN ICGGDLNLHI SAPTNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.16e-57ZF-HD family protein