PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 474aa MW: 51970.7 Da PI: 5.3386 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.1 | 4.2e-33 | 261 | 315 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+ Lt++hvkSHLQkYR+ XP_019165560.1 261 KQRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVDHLTIYHVKSHLQKYRT 315 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.9e-17 | 263 | 314 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m ++t +++ks++qky+ XP_019165560.1 263 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKLMKvDHLTIYHVKSHLQKYR 314 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence |
MEARPALSIQ RVGSRQLNNF GASGALSSSL PVLPTNLEGK YPKLPDSQQI SLERETMQCP 60 PAVAPLSSNS EVAGLMFSSS SGFSSDLHFS SASPLENHSR QPPFISQSTN NESSMLLPDS 120 GVLQSTASSH YSKQNIGPWS TDSLTDFLDY PINTPTHSGQ LQCSNNADCA ITSEDLGKRN 180 DWQEWADQLI TDDDALAANW SDIIADTSTA DPKPKVQYQV SKQSSNLQIQ HSQASQQLVA 240 FPEETSATVP LSSTAGAAPT KQRMRWTPEL HEAFVEAVNK LGGSERATPK GVLKLMKVDH 300 LTIYHVKSHL QKYRTARYKP ESSEASSEKK QSAIDDFPSL DLKAGIEITE ALRLQMEVQK 360 RLHEQLEIQR NLQLRIEEQG RYLQMMFEKQ FKSMPNIDMG KGSSPTSENP VAQLTDGVQT 420 SPGKSDPVAN HPMTGDNDSA NAVASVNDSQ TREEKQKERE TGEVPATSKR AKVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.2 | 2e-91 | G2-like family protein |