PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165539.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 664aa MW: 73054.9 Da PI: 5.2881

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.2	6.4e-09	419	456	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LA+++gLt qV++WF N R + XP_019165539.1 419 FEHflHPYPKDSDKAMLARQTGLTRGQVSNWFINARVR 456 664459******************************88 PP
2	BELL	120.4	7.8e-39	282	352	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +qelq+k +kL s+l+e+d+rY+qy++q+++v+ssF++vag g+akpYt+lAl +iSrhFrcL+dai++qi XP_019165539.1 282 KQELQNKLTKLFSMLDEIDRRYRQYYHQMHMVVSSFDVVAGEGAAKPYTALALLTISRHFRCLRDAISGQI 352 79********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MATYFSSSNN QKDASNFLYS RESLPGSYSE AQAVPGNIMM FMNYSSSSGL CSDTIAESSQ 60 EQSRYTDIPS IGSQQGISSI RGSQIGAHDL SMWKDNRNEM LMMHHPMGGA LDVLQTAHSM 120 QGQGLSLSLG TQIPAGIQVS PQNPSQGFTS FLSPPSIPGE GNGGNRSFGD IDDSHAKQSR 180 AMEYLLPGFP SSYDAMKMDG SPYGMPSIGR AFPDSKYLKA AQQLLDEVVN VKKAVKERGS 240 TKVEVNGTNE VDADSNCKSS DPPVTGSSSN PQEPNELSAN DKQELQNKLT KLFSMLDEID 300 RRYRQYYHQM HMVVSSFDVV AGEGAAKPYT ALALLTISRH FRCLRDAISG QIRVLQKSLG 360 DQDVADNNKG VGISRLRYVD QQLRQQRALQ QLGMMQPHAW RPQRGLPESS VSILRAWLFE 420 HFLHPYPKDS DKAMLARQTG LTRGQVSNWF INARVRLWKP MVEEIYKEEF GDAEFDSNSS 480 SEIAPKATES DTKAFDEKEK GFQPPATSPG DEPSCISGKL FQPKSNRASN VEMVESNLGI 540 SFRDGDHVET DSQYETGDRG GAADTVLQSN GAHNRFMYPA SAYHMPELER FGNGNGNGNG 600 NGVSLTLGLQ QCEGSHNFVS TREDDVYIPS ASSVEPEAGD FNYIDPENRQ HQFGSSHLFH 660 DFVA

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MATYFSSSNN QKDASNFLYS RESLPGSYSE AQAVPGNIMM FMNYSSSSGL CSDTIAESSQ  60
EQSRYTDIPS IGSQQGISSI RGSQIGAHDL SMWKDNRNEM LMMHHPMGGA LDVLQTAHSM  120
QGQGLSLSLG TQIPAGIQVS PQNPSQGFTS FLSPPSIPGE GNGGNRSFGD IDDSHAKQSR  180
AMEYLLPGFP SSYDAMKMDG SPYGMPSIGR AFPDSKYLKA AQQLLDEVVN VKKAVKERGS  240
TKVEVNGTNE VDADSNCKSS DPPVTGSSSN PQEPNELSAN DKQELQNKLT KLFSMLDEID  300
RRYRQYYHQM HMVVSSFDVV AGEGAAKPYT ALALLTISRH FRCLRDAISG QIRVLQKSLG  360
DQDVADNNKG VGISRLRYVD QQLRQQRALQ QLGMMQPHAW RPQRGLPESS VSILRAWLFE  420
HFLHPYPKDS DKAMLARQTG LTRGQVSNWF INARVRLWKP MVEEIYKEEF GDAEFDSNSS  480
SEIAPKATES DTKAFDEKEK GFQPPATSPG DEPSCISGKL FQPKSNRASN VEMVESNLGI  540
SFRDGDHVET DSQYETGDRG GAADTVLQSN GAHNRFMYPA SAYHMPELER FGNGNGNGNG  600
NGVSLTLGLQ QCEGSHNFVS TREDDVYIPS ASSVEPEAGD FNYIDPENRQ HQFGSSHLFH  660
DFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-139	TALE family protein