PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165361.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 316aa    MW: 35703.6 Da    PI: 9.9593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47e-10129176455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_019165361.1 129 SHSLAERVRREKISERMRYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 176
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MTIRISSRFW RIMAGLNGPQ TLESITHFPA AHQPPPLQLG KRKMTLFRRK IWEERASRGE  60
KPTRQAVAVA EEERKDRWKQ KGCQEDVRSS EQTDNNSKKE HSTDTSKVTQ DKKSDYIHVR  120
ARRGQATDSH SLAERVRREK ISERMRYLQD LVPGCNKITG KAGMLDEIIN YVQSLQKQVE  180
FLSMKLAAVN PRLDFNIDSL FTKEMFQSSP SNFPPVGIIS DVSTPSNLLQ LVASLGLEIG  240
ISPSDMPLRT TINSPVSLPK TLLNSSAINQ QGQTCPIWDG ELQNLYAMEV QQGRSPSFTS  300
QPFMGFVEGS NPRMEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.19e-60bHLH family protein