PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165360.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 330aa    MW: 36914.7 Da    PI: 6.7842
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.5e-10143190455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_019165360.1 143 SHSLAERVRREKISERMRYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 190
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGSSMLFPPV QLQGLMNYDD QNLIQILENY GWIERPSDIG INYALSSCSP AATSAAGKKK  60
DDAFPPENLG RESFKRRKTD KAVAEEERKD RWKQKGCQED VRSSEQTDNN SKKEHSTDTS  120
KVTQDKKSDY IHVRARRGQA TDSHSLAERV RREKISERMR YLQDLVPGCN KITGKAGMLD  180
EIINYVQSLQ KQVEFLSMKL AAVNPRLDFN IDSLFTKEMF QSSPSNFPPV GIISDVSTPS  240
NLLQLVASLG LEIGISPSDM PLRTTINSPV SLPKTLLNSS AINQQGQTCP IWDGELQNLY  300
AMEVQQGRSP SFTSQPFMGF VEGSNPRMEI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15878KKKDDAFPPENLGRESFKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-61bHLH family protein