PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165310.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 392aa MW: 43956.5 Da PI: 8.4703

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.7	1.1e-32	265	320	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_019165310.1 265 KQRRCWSPELHKRFINALQQLGGPQVATPKQIRELMQVEGLTNDEVKSHLQKYRLH 320 79****************************************************97 PP
2	Myb_DNA-binding	49.8	7.9e-16	267	318	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e+++++++a +qlGg+ t+k I + m+ +g+t ++ks++qky+ XP_019165310.1 267 RRCWSPELHKRFINALQQLGGPqvaTPKQIRELMQvEGLTNDEVKSHLQKYR 318 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDFISPLESR PPVVLRTITE FLREISMIGN VSEKVERIDD RVRRLEDEMR KIDAFKRELP 60 LCMVLLNDVI IVLKEESKKC RKSLVEPVFE EFLPLKKSSG DDDLDRHYKV DTNKEDSKEK 120 INWVSSLQLW NGGLGNGDNV CSRSDLSNNK HSLEYDLRMS AEGEGNSSVA NDFPVSFKRR 180 NINKAFVPFK GCSGFPVKVV RKDHQEELAG EPGLSLSTPG ITNRREDMVI GDFSSKPSRV 240 VPSSASSTVT NIKARAQPQQ QTSRKQRRCW SPELHKRFIN ALQQLGGPQV ATPKQIRELM 300 QVEGLTNDEV KSHLQKYRLH TRRIPTTQSS PANKSIVVLG NLFTVDQYGE SSKQSSSQSG 360 SPQGTLQLAA SSRGTSMTGS DSMEEDGDDR SE

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDFISPLESR PPVVLRTITE FLREISMIGN VSEKVERIDD RVRRLEDEMR KIDAFKRELP  60
LCMVLLNDVI IVLKEESKKC RKSLVEPVFE EFLPLKKSSG DDDLDRHYKV DTNKEDSKEK  120
INWVSSLQLW NGGLGNGDNV CSRSDLSNNK HSLEYDLRMS AEGEGNSSVA NDFPVSFKRR  180
NINKAFVPFK GCSGFPVKVV RKDHQEELAG EPGLSLSTPG ITNRREDMVI GDFSSKPSRV  240
VPSSASSTVT NIKARAQPQQ QTSRKQRRCW SPELHKRFIN ALQQLGGPQV ATPKQIRELM  300
QVEGLTNDEV KSHLQKYRLH TRRIPTTQSS PANKSIVVLG NLFTVDQYGE SSKQSSSQSG  360
SPQGTLQLAA SSRGTSMTGS DSMEEDGDDR SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-52	G2-like family protein