PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165237.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 943aa MW: 104421 Da PI: 6.9859

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.4	6.6e-29	621	671	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAA+++gvc+T+LKriCRq+GI RWP+Rkik++ XP_019165237.1 621 EKTISLQVLRQYFAGSLKDAARSIGVCPTTLKRICRQHGITRWPSRKIKKV 671 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MGDGSSAPNP NHIFGTGSSS HHNNAVDISL MDELLLDGFW LETTEGSNFW QPAPPFTSSS 60 SSSNPLHSPS SYFPPTSHSN NTAQFTPNQF HNHFPQQTTQ NSTFLHMEEE LDAEFQTNNP 120 DSIPPSSSSP NQAHTFMLQG TEMNKRLWIG PNRSNPTPTA SVKKRLVQAI EYLKESTRDK 180 DVLIQIWVPV KSRGRHVLTT NNQPFFLNPN CKSLADYRHV SRNYQFAADN NSKELVGLPG 240 RVFLNKLPEW TPDVRFFRRE EYPRVSHAKQ YNVSGSLALP VFERGSGTCL GVFEIVTTFQ 300 KANYSPELQD VCKALEAVDL TSSGVSSPLD EQICNQSYQA TLEEIKDVLK CVCDTHKLPM 360 AQTWAPCIQQ GKGGCRHSDE NYTSCVSTIE SACYVRVPQV LEFHQACSEH HLLKGEGVAG 420 GAFMTNQPCF ATDVTAFSKT EYPLSHHARI FGLCAAVAIR LRSIHTGSAD FVLEFFLPPD 480 CKGAEEQKQM LHSLSSVIEQ ICRTLRVVTD QELAVETPFP NQERGSPSAG GLDKEKSEQL 540 VSPPPRDPSQ EASSWFTHMM DAQSKGKSTS VSFSNHKDEL EENFNLTTNW EKTDVDDSGP 600 KESANSSGDF SSGAKRRTKT EKTISLQVLR QYFAGSLKDA ARSIGVCPTT LKRICRQHGI 660 TRWPSRKIKK VGHSLRKLQL VIDSVQGAEG SIQLSSFYSS FPELGSQSLQ GTSNYSASKM 720 SDQLQQVTTQ PEGILPLSPG TTCSKSTSSC SHSSSSSFNC SARAKQSPFT LNSSAGRDAS 780 SAEQSGEMLK RARSDAELHG LGQEDTKLLV RSHSQKIISS HSFQETLAPL SNSTSHNLQN 840 ACTFRVKATF GEEKIRFSLQ PHWRFGDLQH EILARFNIQD GSKFDIKYLD DDSEWVLLTC 900 DADLEECIDI HRSSKSRAIK LSLHYANNPK HGSSSGSRGE YLK

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MGDGSSAPNP NHIFGTGSSS HHNNAVDISL MDELLLDGFW LETTEGSNFW QPAPPFTSSS  60
SSSNPLHSPS SYFPPTSHSN NTAQFTPNQF HNHFPQQTTQ NSTFLHMEEE LDAEFQTNNP  120
DSIPPSSSSP NQAHTFMLQG TEMNKRLWIG PNRSNPTPTA SVKKRLVQAI EYLKESTRDK  180
DVLIQIWVPV KSRGRHVLTT NNQPFFLNPN CKSLADYRHV SRNYQFAADN NSKELVGLPG  240
RVFLNKLPEW TPDVRFFRRE EYPRVSHAKQ YNVSGSLALP VFERGSGTCL GVFEIVTTFQ  300
KANYSPELQD VCKALEAVDL TSSGVSSPLD EQICNQSYQA TLEEIKDVLK CVCDTHKLPM  360
AQTWAPCIQQ GKGGCRHSDE NYTSCVSTIE SACYVRVPQV LEFHQACSEH HLLKGEGVAG  420
GAFMTNQPCF ATDVTAFSKT EYPLSHHARI FGLCAAVAIR LRSIHTGSAD FVLEFFLPPD  480
CKGAEEQKQM LHSLSSVIEQ ICRTLRVVTD QELAVETPFP NQERGSPSAG GLDKEKSEQL  540
VSPPPRDPSQ EASSWFTHMM DAQSKGKSTS VSFSNHKDEL EENFNLTTNW EKTDVDDSGP  600
KESANSSGDF SSGAKRRTKT EKTISLQVLR QYFAGSLKDA ARSIGVCPTT LKRICRQHGI  660
TRWPSRKIKK VGHSLRKLQL VIDSVQGAEG SIQLSSFYSS FPELGSQSLQ GTSNYSASKM  720
SDQLQQVTTQ PEGILPLSPG TTCSKSTSSC SHSSSSSFNC SARAKQSPFT LNSSAGRDAS  780
SAEQSGEMLK RARSDAELHG LGQEDTKLLV RSHSQKIISS HSFQETLAPL SNSTSHNLQN  840
ACTFRVKATF GEEKIRFSLQ PHWRFGDLQH EILARFNIQD GSKFDIKYLD DDSEWVLLTC  900
DADLEECIDI HRSSKSRAIK LSLHYANNPK HGSSSGSRGE YLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein