PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165097.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 421aa MW: 45677.7 Da PI: 6.5916

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.2e-38	125	184	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+s XP_019165097.1 125 PDKILPCPRCNSLDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGSGRRKNKSS 184 7899******************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MGENQKQTRM SEVKDPAIKL FGMTISLPPP PPPPQDGDAD VSISVSTPSQ DNMNTSGVEL 60 TGDKQEVEST VLIDEESVEA VTSSVISEDP SRTQSPDKGT GSSRDIKKDD PSESNESQEK 120 TLKKPDKILP CPRCNSLDTK FCYYNNYNVN QPRHFCKNCQ RYWTAGGIMR NVPVGSGRRK 180 NKSSATNYHH IMVSDSLNAN GAVLAFGSDN LVEKPQNCGP NGYRGSEQVP ACYGGRDTVN 240 EHSNGLERGG NGGVAESMWK NFHGFPPQVP CFPGPPWPCS WNPALNPSSF PVSFYPAAAA 300 PYWRCPWNVA WISPSSSSDL SAQCSSPTSQ TLGKHSREEP LGTSSVLIPK ALRIDDSSEA 360 AKISIWSTLG IKNEKTDSPG ASLLKAFSSK ADEKNHVADH SWLMKANPAA LSRSLNFHES 420 T

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MGENQKQTRM SEVKDPAIKL FGMTISLPPP PPPPQDGDAD VSISVSTPSQ DNMNTSGVEL  60
TGDKQEVEST VLIDEESVEA VTSSVISEDP SRTQSPDKGT GSSRDIKKDD PSESNESQEK  120
TLKKPDKILP CPRCNSLDTK FCYYNNYNVN QPRHFCKNCQ RYWTAGGIMR NVPVGSGRRK  180
NKSSATNYHH IMVSDSLNAN GAVLAFGSDN LVEKPQNCGP NGYRGSEQVP ACYGGRDTVN  240
EHSNGLERGG NGGVAESMWK NFHGFPPQVP CFPGPPWPCS WNPALNPSSF PVSFYPAAAA  300
PYWRCPWNVA WISPSSSSDL SAQCSSPTSQ TLGKHSREEP LGTSSVLIPK ALRIDDSSEA  360
AKISIWSTLG IKNEKTDSPG ASLLKAFSSK ADEKNHVADH SWLMKANPAA LSRSLNFHES  420
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	6e-71	Dof family protein