PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165047.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 461aa    MW: 51531.5 Da    PI: 5.8197
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP126.69.9e-40203279177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cqv+gC  dls+ k+y+rrh+vC+ hsk+++v+v+g+eqrfCqqCsrfh lsefD++krsCr+ La+hnerrrk+q
  XP_019165047.1 203 ICQVHGCFRDLSSSKDYYRRHRVCNDHSKTTKVIVDGIEQRFCQQCSRFHLLSEFDDDKRSCRKSLAGHNERRRKPQ 279
                     5**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MDFMSYAFEG SSGGGVELAA ENGRLVVNER NLKSSLFSHH QIDDNESPNH HEAAEFMEFC  60
LPPPPVVCVD PAMVLSSSSS HPPVTAVFGR IPAAPDMEVE EQACNWLPRY HTSSFNLRSE  120
QTDDQSLFKG NFESAAAAIP VNNKRLVDCQ KAMKSGQNSS KEKLLGDLSS SMEAATGEAS  180
SATLVRRARI TNNLSSSLQH PPICQVHGCF RDLSSSKDYY RRHRVCNDHS KTTKVIVDGI  240
EQRFCQQCSR FHLLSEFDDD KRSCRKSLAG HNERRRKPQF DTHHGPRFFD MMTTLQTEPY  300
LLPELLPVNY FCQDLENTSN CRSTKMEEKH ISFSKLGVQK KSKKLPEIPA AAANILTSDW  360
DLSNNNPSAA GITTPLRCFT SNQLCSGVLE MEGYDAVDDG NMMSVYYEAE MDENSESAEN  420
GTTIDLEQLS THLQRVEHQR NLSAPQTKVQ ESNLFYCFTS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.12e-47SBP family protein