PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 461aa MW: 51531.5 Da PI: 5.8197 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 126.6 | 9.9e-40 | 203 | 279 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gC dls+ k+y+rrh+vC+ hsk+++v+v+g+eqrfCqqCsrfh lsefD++krsCr+ La+hnerrrk+q XP_019165047.1 203 ICQVHGCFRDLSSSKDYYRRHRVCNDHSKTTKVIVDGIEQRFCQQCSRFHLLSEFDDDKRSCRKSLAGHNERRRKPQ 279 5**************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence |
MDFMSYAFEG SSGGGVELAA ENGRLVVNER NLKSSLFSHH QIDDNESPNH HEAAEFMEFC 60 LPPPPVVCVD PAMVLSSSSS HPPVTAVFGR IPAAPDMEVE EQACNWLPRY HTSSFNLRSE 120 QTDDQSLFKG NFESAAAAIP VNNKRLVDCQ KAMKSGQNSS KEKLLGDLSS SMEAATGEAS 180 SATLVRRARI TNNLSSSLQH PPICQVHGCF RDLSSSKDYY RRHRVCNDHS KTTKVIVDGI 240 EQRFCQQCSR FHLLSEFDDD KRSCRKSLAG HNERRRKPQF DTHHGPRFFD MMTTLQTEPY 300 LLPELLPVNY FCQDLENTSN CRSTKMEEKH ISFSKLGVQK KSKKLPEIPA AAANILTSDW 360 DLSNNNPSAA GITTPLRCFT SNQLCSGVLE MEGYDAVDDG NMMSVYYEAE MDENSESAEN 420 GTTIDLEQLS THLQRVEHQR NLSAPQTKVQ ESNLFYCFTS G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 2e-47 | SBP family protein |