PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019164971.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 246aa MW: 28019 Da PI: 6.0482 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.5 | 4.8e-18 | 41 | 94 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++ +eq++ Le+ Fe ++++ e++ +LA++lgL+ rqV +WFqNrRa+ k XP_019164971.1 41 KKRRLAAEQVRFLERSFEVEKKLEPERKLQLANQLGLQPRQVAIWFQNRRARSK 94 5568999*********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 128.1 | 3.6e-41 | 40 | 131 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl++eqv++LE+sFe e+kLeperK +la++Lglqprqva+WFqnrRAR ktkq+Ekdy++Lk+++d+lk+++++L+k++++Lr+e+ XP_019164971.1 40 EKKRRLAAEQVRFLERSFEVEKKLEPERKLQLANQLGLQPRQVAIWFQNRRARSKTKQIEKDYDSLKARFDKLKADHDSLSKQNQHLRNEVV 131 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDSDNNMSTV NTSVWISNTD PSVHEDCGEE MMKGGNCKAE KKRRLAAEQV RFLERSFEVE 60 KKLEPERKLQ LANQLGLQPR QVAIWFQNRR ARSKTKQIEK DYDSLKARFD KLKADHDSLS 120 KQNQHLRNEV VLLTDKLLIQ EQHEGNPKPE TYDATGPLKQ PSCSAGAKKG ENFPMVVSNK 180 HENGSSDSSH VLDSDFSQDN NEDDDSLSRS LFQPFLKLEH HGDGFQSSCN LGFSLEDHTT 240 SSWLWP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 97 | RRARSKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15150.1 | 1e-40 | HD-ZIP family protein |