PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019164632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 204aa MW: 23477.3 Da PI: 4.6699 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.1 | 9.6e-09 | 6 | 50 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT +E+ ++ a + g +Wk+Ia+ + g+++k++ +++ XP_019164632.1 6 ATWTWDEERIFESALLTYVEGtpkRWKKIAKLIS-GKSAKDVEEHY 50 57****************99999***********.**********8 PP | |||||||
2 | Myb_DNA-binding | 27.7 | 6.4e-09 | 100 | 145 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 r WT +E+ ++ a + g +Wk+Ia+ + g+++k++ +++ XP_019164632.1 100 RTTWTWDEERIFESALLTYVEGtpkRWKKIAKLIS-GKSAKDVEEHY 145 678****************99999***********.**********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MANQRATWTW DEERIFESAL LTYVEGTPKR WKKIAKLISG KSAKDVEEHY PILLAKIEAM 60 ESNITQLQTN TNDASSSQRI EEKEVGSVWD LDELVSCSER TTWTWDEERI FESALLTYVE 120 GTPKRWKKIA KLISGKSAKD VEEHYPILLA KIEAMESNIT QLQTNTNDAS SSQQRREEKE 180 VGSVWDLDEL VSCSEVYHAL NKYN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 3e-12 | MYB_related family protein |