PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019164629.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 243aa MW: 27868.6 Da PI: 4.802 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 126.1 | 2.9e-39 | 7 | 135 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +GfrF Pt+eelv++yLk+k++g++ +++ vi+ v+iy++ PwdLp+ + + +ew+fF+ +++ ++g r+nr t +gyWka+g + + XP_019164629.1 7 QGFRFFPTEEELVCFYLKHKLQGDREDIDAVIPVVNIYDHCPWDLPRlvgelCRGDDPEEWFFFVDMQENISRGGRPNRLTPEGYWKASGIPTLM 101 7***************************999***************6456543333556********************************9999 PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127 +s ++e +gl++t++fy+grap+g+kt+W m ey+ XP_019164629.1 102 YS-NNEIIGLRRTMIFYRGRAPTGRKTEWKMIEYK 135 99.999****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEDNCLQGFR FFPTEEELVC FYLKHKLQGD REDIDAVIPV VNIYDHCPWD LPRLVGELCR 60 GDDPEEWFFF VDMQENISRG GRPNRLTPEG YWKASGIPTL MYSNNEIIGL RRTMIFYRGR 120 APTGRKTEWK MIEYKAILGQ PPPTATISDV QLRHEFSLCR IYKTARLDRG FDRRPPAPAA 180 IAVPRAAEPP SPHLQTVPEA IAAQPSSSHP QAVPESVEDS SSLQNNFWDD VCVPLWDWEG 240 MDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.2 | 2e-58 | NAC family protein |