PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019164607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 341aa MW: 37467.4 Da PI: 7.3628 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.7 | 9.1e-05 | 156 | 175 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_019164607.1 156 FSCTVCHKTFNRFNNMQMHM 175 89*****************9 PP | |||||||
2 | zf-C2H2 | 14.6 | 9.7e-05 | 252 | 274 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + k+H +++ XP_019164607.1 252 FACRKCGKAFAVRGDWKTHEKNC 274 78*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MQAHHSNFTH HIMPSTETAH LEQDNHEEID DASTVLSLGP PGQHHHPQNP QKHMKTRLFQ 60 DVLYSSSSLS SSTCYNNLKD HQSLQNYGGG GGRGGGVTVA FHMGPPPSSS SPGGASSSTS 120 FNPSGDVAAA GLTLGQGHHQ YWIPTPAQIL VGPTQFSCTV CHKTFNRFNN MQMHMWGHGS 180 QYRKGPDSLK GTSKPSSSSS SPSSSSSMLR LLPCFCCAEG CKNNIRHARA KPLKDFRTLQ 240 THYKRKHGAK QFACRKCGKA FAVRGDWKTH EKNCGRLWFC ICGSDFKHKR SLKDHVRAFG 300 EGHAAHSESA LLCGGYGEVE EEEEEDDDDD LYYDDDDCES T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13290.1 | 4e-97 | C2H2 family protein |