PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019164296.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 367aa    MW: 38130.2 Da    PI: 9.537
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019164296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.84.3e-3782141362
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     e+al+cprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+n+k+s
  XP_019164296.1  82 ETALRCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNNKRS 141
                     67899**************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MVFSSIPAYL DPSNWQQQQL NHHHHLQGGS SGIPTPHLGV AAAAAPPPQP AVQQHVVGGG  60
GGSIRPGSMA ERARLANMQM PETALRCPRC ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT  120
RGGALRSVPV GGGCRRNNKR SGKGGGGGGA ASSSSSKSTT SSTTAASNDR QSNNSGTVSG  180
VSGPAAHNLL GLSPQIPQLP FMSSSPIPQL SDHHYAGISP AADNLLGGGG DNLLGGGGVA  240
SLLSPGGGII EPWRLQQPPQ FPFLDPMYNF HGGFESPTGF IGGGASAPFR PRISSAMLAQ  300
LAAVKMEDTN NNRNINNQES SLPRQILGIN IPGGNEHWSG DNNGGGGANW SDISASFSSS  360
STSNTHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.13e-39Dof family protein