PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163534.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 128aa MW: 14235.5 Da PI: 10.6246 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.2 | 7.4e-17 | 9 | 58 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y GVr++k +g+Wv+eIr p + kr +lg++ tae Aa a++ a +l+ XP_019163534.1 9 KYLGVRRRK-WGKWVSEIRIPA----TqKRLWLGTYATAEAAAVAHDVAYICLRE 58 899***998.**********84....25***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
MKSKEVKRKY LGVRRRKWGK WVSEIRIPAT QKRLWLGTYA TAEAAAVAHD VAYICLREPT 60 TLDKLNFPAA TLRLTAGVRR GMSPVSVQKA ASDAGMAVDA TTKFKENSVG EKPNFFMGIE 120 GAYWGNNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71520.1 | 2e-28 | ERF family protein |