PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 293aa MW: 34013.6 Da PI: 8.6084 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.7 | 9.3e-19 | 35 | 127 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA vGF+v +s +k k ++ + ++ +vCs+eg+++ ++ + +e+ +r+r+++r+gC a++k + + d+ ++vt++e+ H+H l+ XP_019163445.1 35 DFYVHYAAVVGFDVWRSGDRKDKVSK-VLHKYLVCSREGFKQVTDPEkgetSETLKRRRPSNRVGCSAHFKFNTDGDSGYKVTSFEERHTHCLC 127 6*****************99997776.9************99877766776788899**********************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MEISLGNTTY WITKCDPKMK PVVGQQFKTL EDGIDFYVHY AAVVGFDVWR SGDRKDKVSK 60 VLHKYLVCSR EGFKQVTDPE KGETSETLKR RRPSNRVGCS AHFKFNTDGD SGYKVTSFEE 120 RHTHCLCEEQ LKPFMKVNRK LDMGHKEFIE KCGKTNIGPI KSFNLYGEMV GGFEHVGATS 180 TDFKNHKREI LAYMKRRGAQ MLVAKCQERK EFWLDYYFEY AVDEQEQLSR IFWADEYGRN 240 KFALFGDAMT FDATYKTNRY SLVFVPFTSM DNHKKSTTFA TGLIAKEDVE SYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-30 | FAR1 family protein |