PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | E2F/DP | ||||||||
Protein Properties | Length: 398aa MW: 44784.3 Da PI: 4.6127 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 86.4 | 2.2e-27 | 122 | 187 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_019163337.1 122 RYDSSLGLLTKKFINLIRHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 187 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MQQDLKPQQL PFMVVKPPSG DFRRFSADHP RPSPAQEPDD IIVNTPPLKW KTDMVSYNQV 60 PIDQDPSFGC AVNSPMQTPA SGKAKKAQRV PRTSKSRRYV SQNAADDGSP SGNNVTPVGS 120 CRYDSSLGLL TKKFINLIRH AEDGILDLNK AADTLEVQKR RIYDITNVLE GIGLIEKKLK 180 NRIQWKGLDV SRTRDFDGVS NLQAEVEKLM LEERRIDEEI REMQDRLRDL SEDENNKGWL 240 FVTEEDIKGL PCFQNGTLLA IKAPHGTTLE VPDPDEAVDY PQRRYRVILR STMGPIDVYL 300 VSQFEKKLEE MNAVDVAPSI HSTSGANENA TAMVETEESR GNEVLQEKET ERVSSNVGTS 360 QDFTSGIMKI VPDVDNEADY WLLSDVDVSI TDMWTTEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 1e-126 | E2F/DP family protein |