PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019163005.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 328aa MW: 36521 Da PI: 6.4243

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019163005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.6	3.5e-55	40	171	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdee++v+yLkkkv++ +++ +i evd++k+ePwdLp+k+k ++kew+fF ++d+ky+tg+r+nrat+sgyWkatgkdke+++ XP_019163005.1 40 LPPGFRFHPTDEEIIVHYLKKKVTDITFSS-VAIGEVDLNKCEPWDLPRKAKMmGKKEWFFFWQKDRKYPTGTRTNRATESGYWKATGKDKEIFQ 133 79***********************988.67***********544443778********************************** PP NAM 95 k....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ +vg+kktLvfykgrapkg+kt+W+mheyrl XP_019163005.1 134 SgrgsGNCVVGMKKTLVFYKGRAPKGQKTNWIMHEYRL 171 976655566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
METVPEAASF DPLVGHGGGG GADTEQAAAA AADEAAVVYL PPGFRFHPTD EEIIVHYLKK 60 KVTDITFSSV AIGEVDLNKC EPWDLPRKAK MMGKKEWFFF WQKDRKYPTG TRTNRATESG 120 YWKATGKDKE IFQSGRGSGN CVVGMKKTLV FYKGRAPKGQ KTNWIMHEYR LHPTQFYNTT 180 REEWVVCRVF HKQTTGVVYM RRSPPHNDAV SRIDSISVVD HHLLQSPSKL PPLTDFTDYS 240 DDKPPAAPLP CSLNLQNPPS ALFYPNSDTT TTAAALKAES FSQDAGISPD VTPTEISWEL 300 PDGGAALGGL YDDSMADLDR YYSFLNYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	7e-85	NAC family protein