PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 285aa MW: 32088.8 Da PI: 9.2794 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 106.5 | 3.2e-33 | 44 | 184 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 lp+G++F+P+d+e++ e+L++k +++ ++++ i+ +i++++P++Lp v+++ + +fF++ +++y+tg+rk+r+++ + XP_019162991.1 44 LPAGVKFDPSDQEIL-EHLQAKSVSDSrklhplIDEFIPtIEGEnGICYTHPEKLP-GVNKDGQVRHFFHRPSRAYTTGTRKRRKVHtdadggET 136 799************.677777555553776553333333665557**********.667777888******************74445655577 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+++v+ + +l g kk+Lv+y gr++k+ekt+Wvmh+y+l XP_019162991.1 137 RWHKTGKTRAVFG-EANLRGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 184 8************.999***********66589**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MTWCNNSAAV ATSKFDSRIR SVTCPSCGHS IQLESQGIHD LPGLPAGVKF DPSDQEILEH 60 LQAKSVSDSR KLHPLIDEFI PTIEGENGIC YTHPEKLPGV NKDGQVRHFF HRPSRAYTTG 120 TRKRRKVHTD ADGGETRWHK TGKTRAVFGE ANLRGYKKIL VLYTNYGRQR KPEKTNWVMH 180 QYHLGQDEEE KDGELVVSKV FYQTQPRQCG SSSSSTSKQP LNKTSVSFSR RDNSFVDYYN 240 PPFISSYHVG TQNPDAQPHQ LIPSLVVHAD TSSFINLSSN SSKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-118 | NAC family protein |