PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162875.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 619aa MW: 68148.2 Da PI: 6.7965

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	432	464	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gL+ +qV++WF N R + XP_019162875.1 432 HPYPTDTDKIMLAKQTGLSRNQVSNWFINARVR 464 89*****************************88 PP
2	BELL	110.4	1.1e-35	293	362	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+++kk++L+s+l+eV++rYkqy++qlq+v++sFe vagl++a+p+++lAlka+S+hFrcLkdai+eq+ XP_019162875.1 293 GEHRRKKSRLISMLDEVYRRYKQYYQQLQAVVASFESVAGLNNAAPFANLALKAMSKHFRCLKDAITEQL 362 6899****************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MAEGFEPYHV PQQSRRDKLR VLVQSHPECV DNLHGCAGLA PLYDPPVIPS DLLTCATLHG 60 HHPLLSDHNK HHHTGKGASL MSGATNFSPP TMYMDPQSSV PLHLNQEITR NPFLYAAPPH 120 NLRFHDNNSF HGGEVTVVYK PEPLSVTPGA HEATTPTIRG QGLSLTLSSH HTHQHQSASL 180 PLELNLQRYD ASMTSGLLVS SIHGDGVGSN CSTYNNHDAD QLSRTCSGVP GPFTGYASIL 240 KGSRFLKPAQ QLLEEVCDVV RGVYAEKLEA DSALMDPSME TLVDDSPNSN DGGEHRRKKS 300 RLISMLDEVY RRYKQYYQQL QAVVASFESV AGLNNAAPFA NLALKAMSKH FRCLKDAITE 360 QLQFIGKSQG HMNYEGEASP SSENLGKGLY FQSTAIRNAG LMEHQPVWRP QRGLPERAVT 420 VLRAWLFDHF LHPYPTDTDK IMLAKQTGLS RNQVSNWFIN ARVRLWKPMV EEIHNLETRQ 480 AQKNSQTKEQ NQNNPSEHLS MRNSVACEDA SASMHQIQEL PTKRTRNEAE NFMGGDEAAM 540 DLSYGNLSHH SRLGIGAAAG GSSSVSLTLG LHQNNELGLS DSFPVNAAQR FGLDASSEGF 600 VLSGFEAQNT QFGRDIIGG

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MAEGFEPYHV PQQSRRDKLR VLVQSHPECV DNLHGCAGLA PLYDPPVIPS DLLTCATLHG  60
HHPLLSDHNK HHHTGKGASL MSGATNFSPP TMYMDPQSSV PLHLNQEITR NPFLYAAPPH  120
NLRFHDNNSF HGGEVTVVYK PEPLSVTPGA HEATTPTIRG QGLSLTLSSH HTHQHQSASL  180
PLELNLQRYD ASMTSGLLVS SIHGDGVGSN CSTYNNHDAD QLSRTCSGVP GPFTGYASIL  240
KGSRFLKPAQ QLLEEVCDVV RGVYAEKLEA DSALMDPSME TLVDDSPNSN DGGEHRRKKS  300
RLISMLDEVY RRYKQYYQQL QAVVASFESV AGLNNAAPFA NLALKAMSKH FRCLKDAITE  360
QLQFIGKSQG HMNYEGEASP SSENLGKGLY FQSTAIRNAG LMEHQPVWRP QRGLPERAVT  420
VLRAWLFDHF LHPYPTDTDK IMLAKQTGLS RNQVSNWFIN ARVRLWKPMV EEIHNLETRQ  480
AQKNSQTKEQ NQNNPSEHLS MRNSVACEDA SASMHQIQEL PTKRTRNEAE NFMGGDEAAM  540
DLSYGNLSHH SRLGIGAAAG GSSSVSLTLG LHQNNELGLS DSFPVNAAQR FGLDASSEGF  600
VLSGFEAQNT QFGRDIIGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	6e-81	TALE family protein