PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162796.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 297aa MW: 32405.3 Da PI: 7.0725 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.7 | 1.6e-30 | 95 | 148 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_019162796.1 95 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 148 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 97 | 147 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ XP_019162796.1 97 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 147 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MREEDSNWFA KWEEELPSPD ELMPLSQTLI TPDLALAFDI RNPPNTPLPQ SHHQNQPAPP 60 VSAVHTPSSQ PNSSAEFDSA ELGAGGDEPA RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA 120 VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSNGG GGAGNNSGGG GGVDPATDHL 180 FASSPVPAHF LHPGRPNSEH FMPFVSVPTM QHHHQMAAVV GHHPQLHQPY RHFGSPPNGG 240 QFEHPFLSRQ SQQRVQRMGT PVHNSSPVVP PYVDDVESAT AAANGRKVLT LFPTGDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10760.1 | 6e-94 | G2-like family protein |