PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019162295.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 266aa    MW: 30461.7 Da    PI: 7.6186
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019162295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.11.3e-301771155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    k+rl+Wt+eLH+ F +av+qLGG+e+AtPk il++m+++gLt++hvkSHLQkYR+
  XP_019162295.1 17 KERLKWTQELHNLFEKAVNQLGGPERATPKGILKVMGIPGLTIYHVKSHLQKYRM 71
                    68****************************************************8 PP
2Myb_DNA-binding59.57.1e-191970148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+e++ l+ +av+qlGg+   t+k I + mg  g+t +++ks++qky+
   XP_019162295.1 19 RLKWTQELHNLFEKAVNQLGGPeraTPKGILKVMGiPGLTIYHVKSHLQKYR 70
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MPGKTTEPKM GSEGSSKERL KWTQELHNLF EKAVNQLGGP ERATPKGILK VMGIPGLTIY  60
HVKSHLQKYR MSKFVPEDPI RGKFEIKSIS EILPNFSATS GAQLNEALQI QMNVYKRLSD  120
QHEVQRSLKM KMEAQGRFLE RIMEEHRMKA SCSSKPISKS SYSPIMSSLP SLCEDSESNV  180
KDMESDSEVV DRNETMRSNE EVFPQRKRIR FDDNEAMSQS YSFASESLNN NLLPFSGMEM  240
NNFPWSFMSY QSPMLPAAMY DSRLFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.17e-50G2-like family protein