PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162253.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27810.5 Da PI: 6.6747 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.8 | 1.3e-15 | 64 | 116 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR+riN ++ Lr+llP + +++Kls +++ ++v+YI +Lq XP_019162253.1 64 KKLSHNASERDRRKRINALYSSLRSLLPDsD---QARKLSIPATVSRVVKYIPELQ 116 6789*************************66...*******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MLAFSSPLSF PIFPSPLWPL EESIRHQEFN SDMYRDDMTF LDPHGSSESF KFSESNGGTA 60 MEIKKLSHNA SERDRRKRIN ALYSSLRSLL PDSDQARKLS IPATVSRVVK YIPELQKQVE 120 RLQQKKEELG SRICRQESSS AEFNKRRRVE TQSSIGAVSV TRVGERQVAI HLCTNNGSKV 180 SFADAISCLE KEGMVLTDSS SSQTLENRVF CTLHLQMNGT PGMEVDELKE KVLSCFEEKE 240 ELLALN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 149 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 1e-46 | bHLH family protein |