PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019162251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 26672.6 Da PI: 6.5101 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 rg+W++eEd++l++ ++++G g+W+ I++ g + R++k+c++rw +yl XP_019162251.1 14 RGAWSKEEDQILINHINKYGHGNWRNIPKNAGiL-RCGKSCRLRWVNYL 61 89******************************55.************97 PP | |||||||
2 | Myb_DNA-binding | 47 | 6e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T eE+ l+v+++k +G++ W++Ia++++ gRt++++k+ w++ XP_019162251.1 67 RGHFTSEEEFLIVKLHKIFGNR-WALIAAKLP-GRTDNEIKNIWHT 110 899*******************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRAPCCEKT AVKRGAWSKE EDQILINHIN KYGHGNWRNI PKNAGILRCG KSCRLRWVNY 60 LRPDIKRGHF TSEEEFLIVK LHKIFGNRWA LIAAKLPGRT DNEIKNIWHT RLKKRLHEFD 120 IPADNQVAGD TLKNDSATNF EGAAPSPPAE DNDPATNNIL PPHSKSSSGA AGAAAAAPNN 180 PSDGGSAGDD DQFWTQINDK SGFEFNGADF NVGGVDPGSL QFWQDHLLTW NDDEFLDLWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 1e-64 | MYB family protein |