PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162164.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 268aa MW: 30346.2 Da PI: 8.6629

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.4	1.5e-49	8	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv+++ +++++i+e+diyk++Pw+Lp + + +ekew+fFs+rd+ky++g+r+nra++sgyWkatg+dk++ls+ XP_019162164.1 8 LPPGFRFHPTDEELITCYLMKKVASSVDPTASMIAEADIYKFNPWELPGRGYFGEKEWFFFSPRDRKYPNGHRPNRAAASGYWKATGTDKPILSA 102 79***********************999999***********8778899**********************************98 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ g+kk+Lvfy+gr +kg ktdW+m eyrl XP_019162164.1 103 taSSRCLGVKKSLVFYRGRPQKGIKTDWTMWEYRL 137 767777*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MQDMTQSLPP GFRFHPTDEE LITCYLMKKV ASSVDPTASM IAEADIYKFN PWELPGRGYF 60 GEKEWFFFSP RDRKYPNGHR PNRAAASGYW KATGTDKPIL SATASSRCLG VKKSLVFYRG 120 RPQKGIKTDW TMWEYRLLNN GHQPFRQKGS MRLDDWVLCR VRNKSNNVAE GRFGNGKEDI 180 TEKINPSYYD HHCYAGGSEV LDGVEYFGHF QTGSSSNPLG MYGSQANIMG GSVKEALENI 240 KRVLLFEPCM NGHPQILNQD GSEFNPTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-69	NAC family protein