PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019162068.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 343aa MW: 36748.9 Da PI: 9.3503

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019162068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.2e-39	34	93	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+ lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rkn+k+ XP_019162068.1 34 QEQPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNNKR 93 57899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MMNSYQTDGK NLMASSSSSS TAAAARVMEK PISQEQPLKC PRCDSSNTKF CYYNNYSLSQ 60 PRHFCKACKR YWTRGGTLRN VPVGGGCRKN NKRIRRSSAA SAASSSSSPA AIDVVSSSST 120 SPAVSSAPLQ IPAPTPPPQT KTQINPLFYG LPINPSSELN PPFQRLFGSR VSSSDQSYDN 180 NHDSMISSPG FLGGHGENGF DPLLSSYPVF RSSSSILTTP ITTSTTTLAS LIASSLEQRK 240 FNASGDITNR NFLGMPSYNG ESVMAGNIIL GNGEFLKGDE RQNRLNWNGG GVPMNNHNIL 300 QTEGVVNINY SSTPSDPSFP WNGGWMDPSS MGSSLPAFSH LAS

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MMNSYQTDGK NLMASSSSSS TAAAARVMEK PISQEQPLKC PRCDSSNTKF CYYNNYSLSQ  60
PRHFCKACKR YWTRGGTLRN VPVGGGCRKN NKRIRRSSAA SAASSSSSPA AIDVVSSSST  120
SPAVSSAPLQ IPAPTPPPQT KTQINPLFYG LPINPSSELN PPFQRLFGSR VSSSDQSYDN  180
NHDSMISSPG FLGGHGENGF DPLLSSYPVF RSSSSILTTP ITTSTTTLAS LIASSLEQRK  240
FNASGDITNR NFLGMPSYNG ESVMAGNIIL GNGEFLKGDE RQNRLNWNGG GVPMNNHNIL  300
QTEGVVNINY SSTPSDPSFP WNGGWMDPSS MGSSLPAFSH LAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	4e-33	Dof family protein