PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019161922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 426aa MW: 46702.5 Da PI: 9.0745 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.5 | 1.2e-05 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_019161922.1 69 FVCEICNKGFQRDQNLQLHRRGH 91 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.1 | 0.00058 | 146 | 168 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H + + XP_019161922.1 146 WKCDKCSKRYAVQSDWKAHSKIC 168 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence |
MIKAVQLVDD SMSNLTSASN DNAISISSTQ QPSNTNQAVK RKRNQAGNPD PEAEVVALSP 60 NTLFATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR NKDEVVKRKV YVCPEASCVH 120 HDPARALGDL TGIKKHYSRK HGEKKWKCDK CSKRYAVQSD WKAHSKICGT REYRCDCGTL 180 FSRRDSFITH RAFCDALAEE SAIRSSSLTP LPNALFSTQP PPPLSATATS LQALQNLQAT 240 FNHLRQPAEI PPWLACPPPP PPPTLKATGP TQLLENPNNP STLLVSPPHM SATALLQKAA 300 QLGVTSNNTI NSTGSLIRPH HHHQNQIHHM MGTAAAGFFS SREEELASSY GTNKPAAGHA 360 SLTPGCMEMM GTTGSDTSGF YYHHQGFNGG RENTDIEGLN TRDFLSLTAS FSSSKGFSQN 420 SACWPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45260.1 | 1e-109 | C2H2 family protein |