PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019161635.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 292aa MW: 32988.2 Da PI: 6.3461

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019161635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.8e-51	10	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF P+deelv++yL kk++++++ ++ e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ XP_019161635.1 10 LPPGFRFYPSDEELVCHYLYKKIANEEVLK-GTLVEIDLHTCEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVMDP 103 79***********************655.78***********87788899**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ vg++ktLvfy++rap+g+kt W+mhe+rle XP_019161635.1 104 rSQAIVGMRKTLVFYRNRAPNGVKTGWIMHEFRLE 138 555669************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIANEEVLKG TLVEIDLHTC EPWQLPEVAK 60 LNSSEWYFFS FRDRKYATGF RTNRATTSGY WKATGKDRTV MDPRSQAIVG MRKTLVFYRN 120 RAPNGVKTGW IMHEFRLENP HIPPKEDWVL CRVFHKSKGE TSENNLNTMY DNSIIIPPPA 180 TSPTSLAASP PNMDAVSLPA SAAAYRPIAV ACQNQSATTA AAANFFNVSL SSSVPEHHGF 240 LRSHEMPHSK CETDQYGFLF DMNFEEPNFQ DGGVHSSLDD MRFDDENGMV FI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	3e-93	NAC family protein