PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019161604.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 493aa MW: 52022.5 Da PI: 6.384

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019161604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.2	2.4e-15	258	312	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + kr rr+ +NRe+ArrsR+RK+a + eL + v +L+ eN++L k+l ++++ XP_019161604.1 258 DAKRVRRMLSNRESARRSRRRKQAHLTELDTQVSQLKIENSSLLKRLTDISQKFN 312 689*****************************************99988877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MERVFSVDDI ADQFWLQPPI LLSQPAELDL QGSSSSSSIM NRSSSEWAFQ RFLQEASVVD 60 HNSSASAAAA AASSTSISQS EQVPRDEFLE INQQSLAPNR NSSYRQNNSG TAAAATNSKS 120 TSAMVTSFGS THASDIPDHS EKYQAFLKSR LDLACAAVAS RAMYLRPQDS TTMTPGIGSS 180 VSNTVQTGSQ VPPKGSEHDS LKGQEEGGAP TGIPSLPAVP KKSSGQVRSI SSGSEQSDDD 240 EAEGEGEAET TDKMDPADAK RVRRMLSNRE SARRSRRRKQ AHLTELDTQV SQLKIENSSL 300 LKRLTDISQK FNEAAVDNRV LKADVETLRA KVKMAEETVK NVTGLSPLFQ AMADISSMGM 360 QSFPGNPTDT SIDAALPVQN DPNHHRYYQS PSGVHFQPHD PIIQNGLVDI PPINNMLQVP 420 ATATVGANGI GRATAVPPAT AGASGIGRAT AVSPATVGGS GIGRATGGAS GIGGAAAGST 480 HPMVSMEHFQ KHK

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MERVFSVDDI ADQFWLQPPI LLSQPAELDL QGSSSSSSIM NRSSSEWAFQ RFLQEASVVD  60
HNSSASAAAA AASSTSISQS EQVPRDEFLE INQQSLAPNR NSSYRQNNSG TAAAATNSKS  120
TSAMVTSFGS THASDIPDHS EKYQAFLKSR LDLACAAVAS RAMYLRPQDS TTMTPGIGSS  180
VSNTVQTGSQ VPPKGSEHDS LKGQEEGGAP TGIPSLPAVP KKSSGQVRSI SSGSEQSDDD  240
EAEGEGEAET TDKMDPADAK RVRRMLSNRE SARRSRRRKQ AHLTELDTQV SQLKIENSSL  300
LKRLTDISQK FNEAAVDNRV LKADVETLRA KVKMAEETVK NVTGLSPLFQ AMADISSMGM  360
QSFPGNPTDT SIDAALPVQN DPNHHRYYQS PSGVHFQPHD PIIQNGLVDI PPINNMLQVP  420
ATATVGANGI GRATAVPPAT AGASGIGRAT AVSPATVGGS GIGRATGGAS GIGGAAAGST  480
HPMVSMEHFQ KHK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	280	RRSRRRKQ
2	275	280	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	4e-44	bZIP family protein