PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161472.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 290aa    MW: 32567.3 Da    PI: 4.6521
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.35.5e-32105161258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     dDgy+WrKYGqK++k+s++prsYY+Ct ++C +kk+ver+++dp++++itYeg H h
  XP_019161472.1 105 DDGYKWRKYGQKSIKNSPNPRSYYKCTNPKCGAKKQVERCSDDPDTLIITYEGLHLH 161
                     8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MAAHTEFMYP ESMIMDAEEL IQELLDDESP LFLAPQETIM ESSSFAGVSN YSSFLNSLIY  60
GHANQPLHDA SRSCMLDKGL MVSRDHHESK YTLRIKTNCG NAMADDGYKW RKYGQKSIKN  120
SPNPRSYYKC TNPKCGAKKQ VERCSDDPDT LIITYEGLHL HFAYPFFTLD NEPNNTIDVV  180
PTKKQKKTTA EVVESQEQEQ EKTNQVVYEN PGITNPTPIA QLLDDEWDYS SQGLLQDVVP  240
LVIRRPSSTI CNATTTSYSS SSSFLSPPTS PSLSCSTNNC FLPDFDASNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.13e-39WRKY family protein