PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019161198.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 195aa    MW: 21834.1 Da    PI: 11.2852
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019161198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-1872123156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     + ykGV+++  +g+Wv+e+r+p     + kr+++g++ t+e+Aa+a++ a+++l+ge
  XP_019161198.1  72 PVYKGVWRRG-NGKWVCELREPI----KqKRIWVGSYPTPEMAARAHDVAALALRGE 123
                     68****8777.8*********72....35**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MNESACSSDQ NGHRRRGFSF KESGQLPSAT SLVSGGSCSS SNCMAAHSDE FVLARKPKRP  60
AGRKKFKETR HPVYKGVWRR GNGKWVCELR EPIKQKRIWV GSYPTPEMAA RAHDVAALAL  120
RGEFATLNFA DSLWRLPVSV SKDAKDIRRV AVMVAKGFRE TTTVVAKVVE EEVESKRKTG  180
KTIRASGRRR LHHRV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15967RPAGRKKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.22e-29ERF family protein