PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019160920.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 322aa MW: 36291.4 Da PI: 4.5834

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019160920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3.1e-09	264	297	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_019160920.1 264 WPYPTEADKIALAESTGLDQKQINNWFINQRKRH 297 59*****************************885 PP
2	ELK	31.3	4.6e-11	218	238	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK+ LlrKY+++L+sLk EFs XP_019160920.1 218 LKNTLLRKYGSHLSSLKLEFS 238 9*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MMDETTYGFP STSCDYADKA LMSPDNNNLM MMDYPYAYNY NYNYHPGGAA ADTIPFCGAS 60 TEVAAATTTC VDNEDDDVSS VMIKAKIASH PCYPKLLHAY IDCQKVGAPP EIATVLDEIR 120 REDDELRKRG GGGAVSSCLG ADPELDEFME TYYDMLVKYK SDLSKPFHEA TTFLNTIETQ 180 LSNLCKDESG AVSSDEEDSG GETDIQQESI TKTEERQLKN TLLRKYGSHL SSLKLEFSKK 240 KKKGKLPKEA RQTLLDWWSD HYKWPYPTEA DKIALAESTG LDQKQINNWF INQRKRHWKP 300 SESMQLAVME NLTGQFFSSD DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-106	TALE family protein