PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019160434.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 331aa    MW: 37343.9 Da    PI: 6.7976
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019160434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.51.1e-52111391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eel+++yL+kkv+++k++l +vi+evd++k+ePwd+++k+k     ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  XP_019160434.1  11 VPPGFRFHPTEEELLHYYLRKKVASHKIDL-DVIPEVDLNKLEPWDIQEKCKIgstPQNEWYFFSHKDKKYPTGSRTNRATAAGFWKATGRDKVI 104
                     69****************************.9***************964444222455************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s +++ +gl+ktLvfykgrap+g+k+dW+mheyrl
  XP_019160434.1 105 HS-NSRRIGLRKTLVFYKGRAPRGQKSDWIMHEYRL 139
                     99.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MNLSVNGESQ VPPGFRFHPT EEELLHYYLR KKVASHKIDL DVIPEVDLNK LEPWDIQEKC  60
KIGSTPQNEW YFFSHKDKKY PTGSRTNRAT AAGFWKATGR DKVIHSNSRR IGLRKTLVFY  120
KGRAPRGQKS DWIMHEYRLD DNTSHDNVTG TNLVGEMSSG PEEGWVVCKV FKKKLYHKAA  180
MEYQHHPQTH HQRNDGVLDQ ILTYMGRSSS SKHHLAGETK NILLAGAGAD ENSPPPPPPQ  240
FLHMPPLETT TPSAVDISHI IPSFDDMLAD TQPFYPCYDG AGADPHGGLD FSLDCYGAHP  300
TVDDDLRPYD HNQISQVHST LIMDPLSHLS V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.11e-104NAC family protein