PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB_related | ||||||||
Protein Properties | Length: 298aa MW: 34179.7 Da PI: 7.6953 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.7e-17 | 91 | 136 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E+ l+++++ ++G++ W++Ia++++ gRt++++k++w++++ XP_019159859.1 91 RGKITPQEQRLILQLHSKWGNR-WSKIAQKLP-GRTDNEIKNYWRTHM 136 8999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MDTATINFYQ NGTGRDDEDD DDEERSMDRT RRCSAGSLRE HVRRSAVGFS GQSFRFAKVL 60 VGESQNWIGL KRSGKSCRLR WVNYLQPGLK RGKITPQEQR LILQLHSKWG NRWSKIAQKL 120 PGRTDNEIKN YWRTHMRKKA NEDRANKCAS SSSSSSLSNN SSSSSGASSS PPAVDSRPIP 180 ATNERNFYDT GGIIFEDETK TTPPQQQQEE EEIEKKMDHH HQQQQQVCSS SMDDIWKDME 240 LWAEQQKGGC TMWNYWSEWV WTTTCSSSSN NRMCPPPPPP ASTDRLCFFD NQDYICTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.2 | 5e-46 | MYB_related family protein |