PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159788.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 322aa    MW: 35415.3 Da    PI: 5.8272
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.81.2e-28155207255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +rl+Wtp+LH+rF+++v +L G+ kA+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_019159788.1 155 ARLVWTPQLHKRFLDVVGHL-GISKAVPKTIMQLMNVEGLTRENVASHLQKYRL 207
                     79******************.********************************8 PP
2Myb_DNA-binding42.41.6e-13156206148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT++++++++d+v  lG     +ktI++ m+ +g+t++++ s++qky+
   XP_019159788.1 156 RLVWTPQLHKRFLDVVGHLGISkaVPKTIMQLMNvEGLTRENVASHLQKYR 206
                      789*****************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGEEVELGDY DGVSAAGGDE DRVMEWEDGL PNADDLTPLC QSLIPPELAS AFRISPAPFR  60
TMVDVSRASK VTFSSLQGGQ PQTMMSTNDF NFKAFDEEGN REQMVTDDDT DLTREGSDSR  120
KTRRIESGGG AEEADSALRN ENFGEDSSAK TLKRARLVWT PQLHKRFLDV VGHLGISKAV  180
PKTIMQLMNV EGLTRENVAS HLQKYRLYLK RMQGLPNEGP SPSDHLFAST PVPQSLNESS  240
ESGHGNSHHN SNGHMAMPIP FPYPHQMVPM PMFGHNGHIG VPAGNPNGAP SNGFHHQYYM  300
GQQSQWPGNK FGAYHHVATT EK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.36e-84G2-like family protein