PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019159585.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRAS | ||||||||
Protein Properties | Length: 499aa MW: 55830.5 Da PI: 6.3637 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 420.4 | 1.5e-128 | 140 | 499 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+avs++d++ a++l+ +l +++s +g+p+qRl ay++e+L arla k+ ++++ s s e l+++++++ev+P++kf++ XP_019159585.1 140 LKQLLVACAKAVSDNDFSTAESLMPELCQMVSVSGEPIQRLGAYMLEGLVARLAV------KSPRCKKPS---SFELLSSMHILNEVCPYFKFGY 225 689***************************************************9......777888887...899******************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 ++aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg+++++s ++ l+ +g++L+k+Ae+++vpf+f++ ++ ++ XP_019159585.1 226 MAANGAIAEAMKDEKRVHIIDFQIGQGSQWVTLIQAFAARPGGPPEIRITGIDDSTSAyaRRGGLSIVGRNLSKLAESFKVPFQFHAATMPGCTV 320 ******************************************************998899999************************9999**** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 l+le+L ++pgE laVn++++lh+++ +++rd++L+lvks +Pkvv++ve+e++ n++ F rfleal+yysa+f+sl+++lpr++++ri XP_019159585.1 321 LQLENLGIQPGEPLAVNFAFMLHHTP------DNHRDQLLRLVKSQNPKVVTLVEHESQSNTAAFYPRFLEALDYYSAMFESLDMTLPRNHKQRI 409 *************************9......7789*********************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +vE+++l+r++vn++aceg+er++rhe l kW++r+++aGF+p+pls+ ++ ++k+ll++++ ++yr+ee++g+l+lgW++r Lv+ +aW+ XP_019159585.1 410 NVEQHCLARDVVNIIACEGTERVKRHELLDKWKSRFRMAGFSPYPLSSLVNGTIKTLLENYS-EEYRLEERDGALYLGWRNRDLVASCAWK 499 **************************************************************.55*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MSNAMYYQPV QKAETYCLPQ IQNLDHQPSF TNNGGNHAIH PHCVSYYTEF SLMSWAHGLH 60 NSSSTVSFSP NGSSVSQQES HPYPFGDEVS DLDIKDKLRE LESVMLGPGS DIVDSYANAL 120 VSPEIDSWEQ MIVAIPRGDL KQLLVACAKA VSDNDFSTAE SLMPELCQMV SVSGEPIQRL 180 GAYMLEGLVA RLAVKSPRCK KPSSFELLSS MHILNEVCPY FKFGYMAANG AIAEAMKDEK 240 RVHIIDFQIG QGSQWVTLIQ AFAARPGGPP EIRITGIDDS TSAYARRGGL SIVGRNLSKL 300 AESFKVPFQF HAATMPGCTV LQLENLGIQP GEPLAVNFAF MLHHTPDNHR DQLLRLVKSQ 360 NPKVVTLVEH ESQSNTAAFY PRFLEALDYY SAMFESLDMT LPRNHKQRIN VEQHCLARDV 420 VNIIACEGTE RVKRHELLDK WKSRFRMAGF SPYPLSSLVN GTIKTLLENY SEEYRLEERD 480 GALYLGWRNR DLVASCAWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |