PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159311.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 314aa    MW: 34875.4 Da    PI: 7.7338
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.84.7e-33167224259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYY+Ct+++C+vkk+vers++dp++v++tYeg+Hnh+
  XP_019159311.1 167 EDGYRWRKYGQKAVKNSPFPRSYYKCTTQKCTVKKRVERSHQDPTTVITTYEGQHNHH 224
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSENQFYHDH TRFNPFFGDG DDDHRNPSLY SSNPPHPEFD LASMTSMEYN GNNVLSSSAF  60
PTLLWSSSST RSEVVGPPSS DHHVQECSRK SSSVSVRQPA GSSSSSEAAG GGGGGGEEDS  120
SKSSKNLEYE GGEDKSKKMN KGKKKEEKKQ REPRFAFITK SEIDNLEDGY RWRKYGQKAV  180
KNSPFPRSYY KCTTQKCTVK KRVERSHQDP TTVITTYEGQ HNHHCPATLR GNAAAMLSSP  240
PSFFPSSAPP FPGDLFANQM YPAAPHFPPP IMYNYQQSHG SLIGGQPPPQ PQFDYGLFQE  300
MVASLVHKQE HNNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.14e-47WRKY family protein