PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019159008.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 290aa    MW: 31395.7 Da    PI: 9.543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019159008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-202373256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+++taeeAa+a+++a+++l+ge
  XP_019159008.1 23 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTAEEAARAYDEAARALRGE 73
                    589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MIMAASETPV ITTRAGKKSA TRRFVGVRQR PSGRWVAEIK DSSQRVRLWL GTYDTAEEAA  60
RAYDEAARAL RGENARTNFA PAPAPASPNS SLHSDQSAGS SSDGNNKHGL SFSSLKAKLS  120
KNLQSIMARR NSENKYSSSK SRVSDHFTFA SIFHLRNSYN NYQFQHGPAA VDMKKMEKAV  180
VQPSIVVPSA AAEEAAAAYY CSWETSSDCS SEWMMGFGHR QHINNLDSDN GSEASEAAFL  240
GEQDPQMMGG GWGSSPDTMS ASSSGELLGS RSKRFKVSSS VLVPPTFTQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-17ERF family protein